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Cofit
Protein
Homologs
Top cofit genes for Psyr_2095 from
Pseudomonas syringae pv. syringae B728a ΔmexB
Conserved TM helix
SEED: CmpX
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1385
diacylglycerol kinase
no
0.50
2
Psyr
_0025
shikimate dehydrogenase
no
0.49
3
Psyr
_2279
conserved hypothetical protein
no
0.49
4
Psyr
_0219
phosphomannomutase
0.38
0.48
5
Psyr
_2272
Helix-turn-helix motif protein
no
0.48
6
Psyr
_4842
Phosphoenolpyruvate-protein phosphotransferase
0.30
0.47
7
Psyr
_3541
Short-chain dehydrogenase/reductase SDR
no
0.47
8
Psyr
_1487
conserved hypothetical protein
no
0.47
9
Psyr
_1191
type III transcriptional regulator HrpS
no
0.47
10
Psyr
_1057
alginate biosynthesis protein AlgX
0.63
0.47
11
Psyr
_3794
surface antigen (D15):Surface antigen variable number
no
0.46
12
Psyr
_2692
Polysaccharide deacetylase
no
0.46
13
Psyr
_0815
nicotinate-nucleotide pyrophosphorylase (carboxylating)
no
0.46
14
Psyr
_1218
type III helper protein HrpK1
no
0.46
15
Psyr
_0822
1-phosphofructokinase
0.41
0.45
16
Psyr
_0758
beta-fructofuranosidase
no
0.45
17
Psyr
_4938
Helix-turn-helix, Fis-type
no
0.45
18
Psyr
_1350
site-2 protease, Metallo peptidase, MEROPS family M50B
0.51
0.44
19
Psyr
_2985
DNA-N1-methyladenine dioxygenase
no
0.44
20
Psyr
_1802
transcriptional regulator, AsnC family
no
0.44
Or look for
negative cofitness