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Gene
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Nearby
Cofit
Protein
Homologs
Top cofit genes for Psyr_1962 from
Pseudomonas syringae pv. syringae B728a ΔmexB
TonB-dependent siderophore receptor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1943
Sigma-70 region 2
0.60
0.64
2
Psyr
_0603
N-acylglucosamine 2-epimerase
no
0.58
3
Psyr
_4422
Protein of unknown function DUF461
no
0.55
4
Psyr
_1955
Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix
0.52
0.54
5
Psyr
_1970
Secretion protein HlyD
0.50
0.50
6
Psyr
_1954
conserved hypothetical protein
no
0.49
7
Psyr
_4061
imelysin, Metallo peptidase, MEROPS family M75
no
0.47
8
Psyr
_1964
Protein of unknown function DUF323
0.42
0.46
9
Psyr
_2038
pili assembly chaperone:Bacterial pili assembly chaperone
no
0.46
10
Psyr
_0284
Electron transport protein SCO1/SenC
no
0.45
11
Psyr
_1965
Twin-arginine translocation pathway signal
0.68
0.42
12
Psyr
_0579
RNAse R
no
0.41
13
Psyr
_0202
transcriptional regulator, LysR family
no
0.39
14
Psyr
_4882
protein translocase subunit secB
0.46
0.39
15
Psyr
_4063
Protein of unknown function DUF1111
no
0.38
16
Psyr
_0975
homocysteine S-methyltransferase
no
0.38
17
Psyr
_1953
conserved hypothetical protein
no
0.37
18
Psyr
_4424
Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix
no
0.36
19
Psyr
_4266
transcriptional regulator, LuxR family
no
0.34
20
Psyr
_1969
ABC transporter:Protein of unknown function DUF214
0.47
0.33
Or look for
negative cofitness