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Cofit
Protein
Homologs
Top cofit genes for Psyr_0509 from
Pseudomonas syringae pv. syringae B728a ΔmexB
PAS:GGDEF
SEED: Sensory box/GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1302
Leucine-rich repeat protein
no
0.48
2
Psyr
_1925
diaminobutyrate aminotransferase apoenzyme
no
0.47
3
Psyr
_4493
PAS:GGDEF
no
0.44
4
Psyr
_1455
conserved hypothetical protein
no
0.44
5
Psyr
_4871
hypothetical protein
no
0.43
6
Psyr
_1157
diguanylate cyclase with PAS/PAC sensor
no
0.42
7
Psyr
_1204
hypothetical protein
no
0.42
8
Psyr
_3593
K+ transporter Trk
0.39
0.42
9
Psyr
_3269
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
no
0.41
10
Psyr
_2087
aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming)
no
0.40
11
Psyr
_3065
luciferase
no
0.40
12
Psyr
_4064
lipoprotein, putative
no
0.40
13
Psyr
_2141
hypothetical protein
no
0.40
14
Psyr
_2682
methyl-accepting chemotaxis sensory transducer
no
0.39
15
Psyr
_2664
hypothetical protein
no
0.39
16
Psyr
_4205
insecticidal toxin complex protein TcdA1
no
0.39
17
Psyr
_3813
type III effector HopAF1
no
0.39
18
Psyr
_3547
transcriptional regulator, TetR family
no
0.39
19
Psyr
_3493
conserved hypothetical protein
no
0.39
20
Psyr
_3632
conserved hypothetical protein
no
0.39
Or look for
negative cofitness