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  • Top cofit genes for PfGW456L13_890 from Pseudomonas fluorescens GW456-L13

    FIG006231: RNA-binding protein
    SEED: FIG006231: RNA-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.46 0.45
    2 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) 0.66 0.45
    3 PfGW456L13_1686 UPF0246 protein YaaA 0.57 0.45
    4 PfGW456L13_995 Cell division protein FtsX 0.51 0.39
    5 PfGW456L13_4509 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.59 0.38
    6 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.59 0.37
    7 PfGW456L13_893 Z-ring-associated protein ZapA 0.35 0.37
    8 PfGW456L13_546 Membrane bound c-di-GMP receptor LapD no 0.33
    9 PfGW456L13_3468 Multidrug resistance protein A no 0.33
    10 PfGW456L13_3959 Excinuclease ABC subunit B 0.60 0.32
    11 PfGW456L13_4247 NLP/P60 family protein 0.22 0.31
    12 PfGW456L13_3549 pyridoxal phosphate-dependent deaminase, putative no 0.31
    13 PfGW456L13_891 FIG00953390: hypothetical protein 0.32 0.30
    14 PfGW456L13_1494 COG1496: Uncharacterized conserved protein no 0.30
    15 PfGW456L13_2939 D-glycerate transporter (predicted) no 0.30
    16 PfGW456L13_1137 Predicted signal-transduction protein containing cAMP-binding and CBS domains no 0.30
    17 PfGW456L13_3758 Pigment protein no 0.30
    18 PfGW456L13_4668 RecA protein 0.51 0.30
    19 PfGW456L13_4263 FIG00953885: hypothetical protein 0.35 0.30
    20 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I 0.41 0.29

    Or look for negative cofitness