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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_72 from
Pseudomonas fluorescens GW456-L13
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_4650
membrane protein, putative
no
0.39
2
PfGW456L13
_349
tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)
no
0.37
3
PfGW456L13
_1489
Type IV fimbriae expression regulatory protein PilR
no
0.36
4
PfGW456L13
_1483
Type IV fimbrial biogenesis protein PilV
no
0.34
5
PfGW456L13
_2640
Nudix-like NDP and NTP phosphohydrolase YmfB
no
0.33
6
PfGW456L13
_719
cytosolic long-chain acyl-CoA thioester hydrolase family protein
no
0.33
7
PfGW456L13
_3393
FIG00481831: hypothetical protein
no
0.33
8
PfGW456L13
_1439
Transcriptional activator protein SolR
no
0.33
9
PfGW456L13
_4319
FlhB domain protein
no
0.33
10
PfGW456L13
_1985
Alginate biosynthesis transcriptional activator
no
0.33
11
PfGW456L13
_1810
FOG: GGDEF domain
no
0.33
12
PfGW456L13
_318
Histidine transport protein (permease)
no
0.33
13
PfGW456L13
_4287
Outer membrane porin, OprD family
no
0.32
14
PfGW456L13
_1415
putative exported protein
no
0.32
15
PfGW456L13
_3331
FIG00953564: hypothetical protein
no
0.32
16
PfGW456L13
_2257
putative ATP/GTP-binding protein
no
0.32
17
PfGW456L13
_165
Peptidase C14, caspase catalytic subunit p20
no
0.31
18
PfGW456L13
_3087
hypothetical protein
no
0.31
19
PfGW456L13
_3455
Anaerobic dehydrogenases, typically selenocysteine-containing
no
0.31
20
PfGW456L13
_3670
Transcriptional regulator, LysR family
no
0.31
Or look for
negative cofitness