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Cofit
Top cofit genes for PfGW456L13_5237 from
Pseudomonas fluorescens GW456-L13
tRNA-Gly-CCC
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_4096
hypothetical protein
no
0.47
2
PfGW456L13
_2381
hypothetical protein
no
0.42
3
PfGW456L13
_4361
Flagellin protein FlaG
no
0.41
4
PfGW456L13
_2595
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
no
0.40
5
PfGW456L13
_697
Transcriptional regulator, AsnC family
no
0.39
6
PfGW456L13
_4949
Ferrichrome-iron receptor
no
0.39
7
PfGW456L13
_86
Urease accessory protein UreD
no
0.38
8
PfGW456L13
_2484
Transcriptional regulators, LysR family
no
0.38
9
PfGW456L13
_382
Abortive infection bacteriophage resistance protein
no
0.38
10
PfGW456L13
_3107
Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)
no
0.38
11
PfGW456L13
_3501
RNA polymerase sigma-70 factor, ECF subfamily
no
0.36
12
PfGW456L13
_3445
hypothetical protein
no
0.36
13
PfGW456L13
_3012
Fap amyloid fibril minor component
no
0.36
14
PfGW456L13
_4203
Thiamin ABC transporter, transmembrane component
no
0.36
15
PfGW456L13
_3119
Aminomethyltransferase (EC 2.1.2.10)
no
0.35
16
PfGW456L13
_2535
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.35
17
PfGW456L13
_1794
Acetolactate synthase, large subunit (EC 2.2.1.6)
no
0.35
18
PfGW456L13
_4028
FIG00954981: hypothetical protein
no
0.35
19
PfGW456L13
_4109
Magnesium and cobalt transport protein CorA
no
0.35
20
PfGW456L13
_4463
COGs COG3146
no
0.35
Or look for
negative cofitness