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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_4439 from
Pseudomonas fluorescens GW456-L13
SoxH protein, homolog
SEED: SoxH protein, homolog
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_315
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
no
0.42
2
PfGW456L13
_3756
Succinyl-CoA synthetase, alpha subunit
no
0.35
3
PfGW456L13
_2995
AFG1-like ATPase
no
0.34
4
PfGW456L13
_4891
Acyl-CoA dehydrogenase (EC 1.3.8.7)
no
0.33
5
PfGW456L13
_1949
Transcriptional regulator, TetR family
no
0.32
6
PfGW456L13
_1834
Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
no
0.31
7
PfGW456L13
_4802
Integral membrane protein
0.27
0.30
8
PfGW456L13
_2414
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
no
0.30
9
PfGW456L13
_1944
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
no
0.30
10
PfGW456L13
_4579
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family
no
0.30
11
PfGW456L13
_246
FIG064705: cation/hydrogen antiporter
no
0.29
12
PfGW456L13
_4248
NLP/P60 family protein
no
0.29
13
PfGW456L13
_875
Exopolyphosphatase (EC 3.6.1.11)
no
0.29
14
PfGW456L13
_1057
Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)
no
0.29
15
PfGW456L13
_1013
NLP/P60 family protein
no
0.29
16
PfGW456L13
_1741
Formate dehydrogenase-O, major subunit (EC 1.2.1.2)
0.23
0.29
17
PfGW456L13
_4351
Flagellar assembly protein FliH
no
0.28
18
PfGW456L13
_3250
Glycogen debranching enzyme (EC 3.2.1.-)
no
0.28
19
PfGW456L13
_1003
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
no
0.28
20
PfGW456L13
_333
Methyl-accepting chemotaxis protein
no
0.28
Or look for
negative cofitness