Top cofit genes for PfGW456L13_4207 from Pseudomonas fluorescens GW456-L13

Periplasmic protease
SEED: Periplasmic protease
KEGG: carboxyl-terminal processing protease

Rank Hit Name Description Conserved? Cofitness  
1 PfGW456L13_1580 FIG140336: TPR domain protein 0.86 0.57
2 PfGW456L13_4859 Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) 0.92 0.56
3 PfGW456L13_2651 Cell division protein FtsK 0.90 0.52
4 PfGW456L13_1913 Ribonuclease BN (EC 3.1.-.-) 0.48 0.52
5 PfGW456L13_355 Carboxyl-terminal protease (EC 3.4.21.102) 0.87 0.51
6 PfGW456L13_4254 FIG00955360: hypothetical protein 0.43 0.51
7 PfGW456L13_656 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) 0.43 0.50
8 PfGW456L13_5046 Predicted D-glucarate or D-galactorate regulator, GntR family 0.42 0.49
9 PfGW456L13_4677 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.90 0.49
10 PfGW456L13_1852 Holliday junction DNA helicase RuvA no 0.47
11 PfGW456L13_282 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.96 0.47
12 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) 0.95 0.46
13 PfGW456L13_1842 Outer membrane porin, OprD family 0.43 0.46
14 PfGW456L13_845 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.71 0.46
15 PfGW456L13_3984 Lipopolysaccharide biosynthesis protein RffA 0.77 0.46
16 PfGW456L13_1233 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.74 0.45
17 PfGW456L13_2552 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) 0.71 0.45
18 PfGW456L13_2553 ATP-dependent Clp protease ATP-binding subunit ClpX 0.84 0.45
19 PfGW456L13_3980 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) no 0.44
20 PfGW456L13_1368 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) 0.90 0.44

Or look for negative cofitness