Top cofit genes for PfGW456L13_3728 from Pseudomonas fluorescens GW456-L13

Transcriptional Regulator, AraC family
SEED: Transcriptional Regulator, AraC family

Rank Hit Name Description Conserved? Cofitness  
1 PfGW456L13_1003 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.18 0.44
2 PfGW456L13_3941 tRNA pseudouridine synthase A (EC 4.2.1.70) no 0.43
3 PfGW456L13_1614 Zn-dependent protease with chaperone function no 0.42
4 PfGW456L13_946 Outer membrane protein assembly factor YaeT precursor no 0.41
5 PfGW456L13_4579 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family no 0.40
6 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) no 0.40
7 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) no 0.39
8 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) no 0.38
9 PfGW456L13_789 hypothetical protein no 0.38
10 PfGW456L13_5096 FIG004454: RNA binding protein no 0.37
11 PfGW456L13_5021 FOG: TPR repeat no 0.37
12 PfGW456L13_5060 Peptide chain release factor 3 no 0.37
13 PfGW456L13_4842 Translation elongation factor LepA no 0.37
14 PfGW456L13_1862 Queuosine Biosynthesis QueC ATPase no 0.36
15 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF no 0.36
16 PfGW456L13_143 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) 0.24 0.36
17 PfGW456L13_1600 Tryptophan synthase beta chain like (EC 4.2.1.20) no 0.36
18 PfGW456L13_1949 Transcriptional regulator, TetR family no 0.36
19 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) no 0.35
20 PfGW456L13_1914 Peptide deformylase (EC 3.5.1.88) no 0.35

Or look for negative cofitness