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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_3305 from
Pseudomonas fluorescens GW456-L13
BatD
SEED: BatD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_3300
MoxR-like ATPase in aerotolerance operon
0.99
0.90
2
PfGW456L13
_3304
TPR domain protein in aerotolerance operon
0.99
0.89
3
PfGW456L13
_3303
BatA (Bacteroides aerotolerance operon)
0.99
0.87
4
PfGW456L13
_601
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
0.81
0.87
5
PfGW456L13
_3301
hypothetical protein PA3071
0.99
0.84
6
PfGW456L13
_4836
Transglycosylase, Slt family
0.98
0.81
7
PfGW456L13
_4701
Membrane-associated zinc metalloprotease
0.56
0.74
8
PfGW456L13
_3302
FIG00954674: hypothetical protein
0.96
0.59
9
PfGW456L13
_198
acyltransferase family protein
no
0.53
10
PfGW456L13
_1363
Rare lipoprotein A precursor
0.56
0.47
11
PfGW456L13
_1133
Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent
no
0.47
12
PfGW456L13
_1845
Cold shock protein CspC
no
0.46
13
PfGW456L13
_3936
Colicin V production protein
0.37
0.46
14
PfGW456L13
_3991
Capsular polysaccharide biosynthesis protein
no
0.44
15
PfGW456L13
_179
Putative esterase, FIGfam005057
0.53
0.43
16
PfGW456L13
_274
DamX, an inner membrane protein involved in bile resistance
0.59
0.42
17
PfGW456L13
_355
Carboxyl-terminal protease (EC 3.4.21.102)
0.39
0.41
18
PfGW456L13
_1580
FIG140336: TPR domain protein
0.35
0.40
19
PfGW456L13
_1045
Amine oxidase [flavin-containing] (EC 1.4.3.4)
0.40
0.39
20
PfGW456L13
_3821
benABC operon transcriptional activator BenR
no
0.39
Or look for
negative cofitness