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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_3186 from
Pseudomonas fluorescens GW456-L13
Transcriptional regulator, AraC family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_4322
CheW domain protein
no
0.44
2
PfGW456L13
_1617
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
no
0.43
3
PfGW456L13
_3163
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
no
0.43
4
PfGW456L13
_4424
FIG00953416: hypothetical protein
no
0.43
5
PfGW456L13
_3820
hypothetical protein
no
0.42
6
PfGW456L13
_3482
hypothetical protein
no
0.42
7
PfGW456L13
_2075
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
no
0.42
8
PfGW456L13
_4152
Protein containing domains DUF404, DUF407
0.22
0.42
9
PfGW456L13
_2296
Thiol:disulfide interchange protein DsbG precursor
no
0.41
10
PfGW456L13
_4419
Permeases of the drug/metabolite transporter (DMT) superfamily
no
0.41
11
PfGW456L13
_3064
FIG00955635: hypothetical protein
no
0.41
12
PfGW456L13
_4126
Hydantoin permease
0.22
0.41
13
PfGW456L13
_1801
FIG00954888: hypothetical protein
no
0.40
14
PfGW456L13
_2598
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
no
0.38
15
PfGW456L13
_642
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
no
0.38
16
PfGW456L13
_2503
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)
no
0.38
17
PfGW456L13
_1772
Probable Co/Zn/Cd efflux system membrane fusion protein
no
0.38
18
PfGW456L13
_3004
Cell surface protein
no
0.38
19
PfGW456L13
_3396
Fumarylacetoacetate hydrolase family protein
no
0.37
20
PfGW456L13
_4208
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.37
Or look for
negative cofitness