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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_3010 from
Pseudomonas fluorescens GW456-L13
Fap amyloid fibril major component
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_607
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA
no
0.38
2
PfGW456L13
_3893
Transcriptional regulator, MerR family
no
0.31
3
PfGW456L13
_365
A/G-specific adenine glycosylase (EC 3.2.2.-)
no
0.30
4
PfGW456L13
_2028
D-lactate dehydrogenase (EC 1.1.1.28)
no
0.30
5
PfGW456L13
_3926
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
no
0.29
6
PfGW456L13
_2942
hypothetical protein
no
0.29
7
PfGW456L13
_907
Putative stomatin/prohibitin-family membrane protease subunit YbbK
0.47
0.29
8
PfGW456L13
_2715
Adenylate cyclase (EC 4.6.1.1)
no
0.28
9
PfGW456L13
_3201
Alpha-glucoside transport ATP-binding protein AglK
no
0.28
10
PfGW456L13
_1333
FIG00638718: hypothetical protein
no
0.27
11
PfGW456L13
_1088
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
no
0.27
12
PfGW456L13
_3101
FIG018171: hypothetical protein of Cupin superfamily
no
0.27
13
PfGW456L13
_4511
Rhodanese-like domain protein
0.13
0.27
14
PfGW456L13
_260
General secretion pathway protein J
no
0.27
15
PfGW456L13
_2068
Similar to TadZ/CpaE, associated with Flp pilus assembly
no
0.27
16
PfGW456L13
_1315
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25)
no
0.26
17
PfGW456L13
_1099
FIG00953563: hypothetical protein
no
0.26
18
PfGW456L13
_598
Zinc uptake regulation protein ZUR
no
0.26
19
PfGW456L13
_5044
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
no
0.26
20
PfGW456L13
_1514
Methyltransferase (EC 2.1.1.-)
0.23
0.26
Or look for
negative cofitness