Top cofit genes for PfGW456L13_3006 from Pseudomonas fluorescens GW456-L13

Sigma-54 dependent transcriptional regulator
SEED: Sigma-54 dependent transcriptional regulator

Rank Hit Name Description Conserved? Cofitness  
1 PfGW456L13_2883 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) no 0.40
2 PfGW456L13_1090 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.39
3 PfGW456L13_4213 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) no 0.38
4 PfGW456L13_2934 Permease of the drug/metabolite transporter (DMT) superfamily no 0.36
5 PfGW456L13_1036 Malonate transporter, MadM subunit no 0.36
6 PfGW456L13_116 Cobalt-zinc-cadmium resistance protein no 0.36
7 PfGW456L13_2956 Transcriptional regulatory protein RstA 0.22 0.35
8 PfGW456L13_3172 long-chain acyl-CoA synthetase no 0.35
9 PfGW456L13_3901 FIG00953292: hypothetical protein no 0.35
10 PfGW456L13_1331 hypothetical protein no 0.35
11 PfGW456L13_374 FIG00954739: hypothetical protein 0.19 0.35
12 PfGW456L13_3422 hypothetical protein no 0.34
13 PfGW456L13_406 FIG00954962: hypothetical protein no 0.34
14 PfGW456L13_1617 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.34
15 PfGW456L13_3868 Disease resistance protein / Tetratricopeptide repeat-containing protein no 0.34
16 PfGW456L13_1461 FIG00960839: hypothetical protein no 0.34
17 PfGW456L13_245 FIG021862: membrane protein, exporter no 0.34
18 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.55 0.34
19 PfGW456L13_2914 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.33
20 PfGW456L13_2367 Aha1 domain superfamily no 0.33

Or look for negative cofitness