Top cofit genes for PfGW456L13_2678 from Pseudomonas fluorescens GW456-L13

Exoenzymes regulatory protein AepA precursor

Rank Hit Name Description Conserved? Cofitness  
1 PfGW456L13_3025 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.53
2 PfGW456L13_4510 Putative permease PerM (= YfgO) no 0.48
3 PfGW456L13_2798 Putative TEGT family carrier/transport protein no 0.48
4 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.54 0.47
5 PfGW456L13_505 HlyD family secretion protein no 0.46
6 PfGW456L13_3162 Ferrichrome-iron receptor no 0.45
7 PfGW456L13_507 Inner membrane component of tripartite multidrug resistance system no 0.44
8 PfGW456L13_3217 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) no 0.44
9 PfGW456L13_179 Putative esterase, FIGfam005057 no 0.43
10 PfGW456L13_1641 Predicted endonuclease distantly related to archaeal Holliday junction resolvase no 0.43
11 PfGW456L13_1601 FIG00953775: hypothetical protein no 0.43
12 PfGW456L13_2463 Selenophosphate-dependent tRNA 2-selenouridine synthase no 0.42
13 PfGW456L13_587 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) no 0.42
14 PfGW456L13_506 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PfGW456L13_504, PfGW456L13_505, PfGW456L13_507) (from data) no 0.42
15 PfGW456L13_3645 Transcriptional regulator, AsnC family no 0.42
16 PfGW456L13_3298 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form no 0.41
17 PfGW456L13_508 Transcriptional regulator, MarR family no 0.41
18 PfGW456L13_4282 Nucleoside ABC transporter, periplasmic nucleoside-binding protein no 0.40
19 PfGW456L13_4110 Ribonuclease E inhibitor RraA no 0.39
20 PfGW456L13_4807 ATP-dependent protease La (EC 3.4.21.53) Type I no 0.39

Or look for negative cofitness