Top cofit genes for PfGW456L13_2581 from Pseudomonas fluorescens GW456-L13

Transmembrane regulator protein PrtR
SEED: Transmembrane regulator protein PrtR

Rank Hit Name Description Conserved? Cofitness  
1 PfGW456L13_3398 Transcriptional regulator, TetR family no 0.40
2 PfGW456L13_4677 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.35 0.39
3 PfGW456L13_5046 Predicted D-glucarate or D-galactorate regulator, GntR family 0.77 0.37
4 PfGW456L13_728 Pyruvate carboxyl transferase subunit A (EC 6.4.1.1) 0.59 0.36
5 PfGW456L13_729 Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) no 0.36
6 PfGW456L13_1525 Two-component sensor CbrA: intrcellular carbon:nitrogen balance 0.67 0.36
7 PfGW456L13_5118 D-lactate dehydrogenase (quinone), FeS subunit (EC 1.1.5.12) (from data) 0.22 0.36
8 PfGW456L13_1526 FIG00954153: hypothetical protein no 0.36
9 PfGW456L13_727 LysR family transcriptional regulator PA5437 0.64 0.35
10 PfGW456L13_3339 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) no 0.35
11 PfGW456L13_3640 Uricase (urate oxidase) (EC 1.7.3.3) no 0.35
12 PfGW456L13_1625 FIG00958649: hypothetical protein 0.22 0.35
13 PfGW456L13_3494 hypothetical protein no 0.34
14 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) no 0.34
15 PfGW456L13_555 Glycine cleavage system transcriptional activator 0.26 0.33
16 PfGW456L13_2411 Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) (from data) no 0.33
17 PfGW456L13_236 Acyl carrier protein (ACP1) no 0.33
18 PfGW456L13_383 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) no 0.33
19 PfGW456L13_302 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) no 0.33
20 PfGW456L13_2250 Probable protease htpX homolog (EC 3.4.24.-) 0.47 0.33

Or look for negative cofitness