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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_2459 from
Pseudomonas fluorescens GW456-L13
Transcriptional regulator, AraC family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_2304
ABC transporter in pyoverdin gene cluster, permease component
no
0.42
2
PfGW456L13
_1491
FIG00953647: hypothetical protein
no
0.40
3
PfGW456L13
_1688
Predicted ATPase related to phosphate starvation-inducible protein PhoH
0.33
0.39
4
PfGW456L13
_2649
Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)
no
0.38
5
PfGW456L13
_2305
ABC transporter in pyoverdin gene cluster, ATP-binding component
no
0.37
6
PfGW456L13
_3400
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.37
7
PfGW456L13
_1978
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)
no
0.37
8
PfGW456L13
_164
hypothetical protein
no
0.36
9
PfGW456L13
_201
Hypothetical protein FIG015671 in large core OS assembly cluster
no
0.35
10
PfGW456L13
_3343
ABC transporter, periplasmic substrate-binding protein
no
0.35
11
PfGW456L13
_532
Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
no
0.33
12
PfGW456L13
_2783
Phage tail fibers
no
0.33
13
PfGW456L13
_2206
UPF0028 protein YchK
no
0.33
14
PfGW456L13
_2306
FIG014801: Cation ABC transporter, periplasmic cation-binding protein
no
0.33
15
PfGW456L13
_4527
tricarboxylate transporter component TctB
(from data)
no
0.33
16
PfGW456L13
_2475
putative lipoprotein
no
0.33
17
PfGW456L13
_1354
DedA protein
no
0.33
18
PfGW456L13
_332
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
no
0.33
19
PfGW456L13
_1793
Glycine cleavage system transcriptional activator
no
0.32
20
PfGW456L13
_620
Radical SAM domain protein
no
0.32
Or look for
negative cofitness