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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_1956 from
Pseudomonas fluorescens GW456-L13
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_3409
Transcriptional regulator, IclR family
no
0.43
2
PfGW456L13
_587
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
no
0.39
3
PfGW456L13
_165
Peptidase C14, caspase catalytic subunit p20
no
0.39
4
PfGW456L13
_4262
FIG00956657: hypothetical protein
no
0.38
5
PfGW456L13
_4228
FIG00956435: hypothetical protein
no
0.38
6
PfGW456L13
_2536
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
no
0.38
7
PfGW456L13
_4096
hypothetical protein
no
0.38
8
PfGW456L13
_3651
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
no
0.38
9
PfGW456L13
_505
HlyD family secretion protein
no
0.38
10
PfGW456L13
_382
Abortive infection bacteriophage resistance protein
no
0.36
11
PfGW456L13
_3962
FIG00967200: hypothetical protein
no
0.36
12
PfGW456L13
_3143
Permeases of the major facilitator superfamily
no
0.36
13
PfGW456L13
_4028
FIG00954981: hypothetical protein
no
0.35
14
PfGW456L13
_719
cytosolic long-chain acyl-CoA thioester hydrolase family protein
no
0.35
15
PfGW456L13
_3120
LysR-family transcriptional regulator
no
0.35
16
PfGW456L13
_3151
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
no
0.35
17
PfGW456L13
_416
Transcriptional regulator, Cro/CI family
no
0.35
18
PfGW456L13
_3485
hypothetical protein
no
0.35
19
PfGW456L13
_3501
RNA polymerase sigma-70 factor, ECF subfamily
no
0.35
20
PfGW456L13
_4184
FIG137887: membrane protein related to purine degradation
no
0.34
Or look for
negative cofitness