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Cofit
Protein
Homologs
Top cofit genes for PfGW456L13_1053 from
Pseudomonas fluorescens GW456-L13
Putative transport
SEED: Putative transport
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PfGW456L13
_3850
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone
no
0.43
2
PfGW456L13
_3689
TonB-dependent receptor
no
0.42
3
PfGW456L13
_3394
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
no
0.39
4
PfGW456L13
_4975
Transcriptional regulator, MerR family
no
0.36
5
PfGW456L13
_3763
Methylamine dehydrogenase light chain precursor (EC 1.4.99.3)
no
0.35
6
PfGW456L13
_1847
Glycerate kinase (EC 2.7.1.31)
no
0.35
7
PfGW456L13
_2944
hypothetical protein
no
0.34
8
PfGW456L13
_5125
FIG002188: hypothetical protein
no
0.34
9
PfGW456L13
_1287
membrane protein
no
0.34
10
PfGW456L13
_19
Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase
no
0.33
11
PfGW456L13
_5124
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
no
0.32
12
PfGW456L13
_1436
putative Cytochrome bd2, subunit II
0.36
0.31
13
PfGW456L13
_626
Phosphoglycolate phosphatase (EC 3.1.3.18)
no
0.31
14
PfGW456L13
_4074
Recombination protein RecR
no
0.31
15
PfGW456L13
_4018
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
no
0.30
16
PfGW456L13
_2918
FIG00954920: hypothetical protein
no
0.30
17
PfGW456L13
_1777
GGDEF domain/EAL domain protein
no
0.30
18
PfGW456L13
_1173
Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25)
no
0.30
19
PfGW456L13
_4137
small molecule metabolism; degradation; amines
no
0.29
20
PfGW456L13
_2184
putative polysaccharide polymerase
no
0.29
Or look for
negative cofitness