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Cofit
Top cofit genes for PP_t64 from
Pseudomonas putida KT2440
tRNA-Gly
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1015
mannose/glucose ABC transporter, glucose-binding periplasmic protein
no
0.21
2
PP
_1301
quality control serine endoprotease DegS
no
0.20
3
PP
_1017
mannose/glucose ABC transporter, permease protein
no
0.20
4
PP
_1020
putative glucose-6-phosphate 1-epimerase
no
0.19
5
PP
_1011
glucokinase
no
0.19
6
PP
_5090
putative cell division protein
no
0.18
7
PP
_3532
Transcriptional regulator, AsnC family
no
0.18
8
PP
_3244
Magnesium transporter, MgtC family
no
0.18
9
PP
_1016
mannose/glucose ABC transporter, permease protein
no
0.18
10
PP
_2513
4-oxalomesaconate tautomerase
no
0.17
11
PP
_1348
putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase
no
0.17
12
PP
_2714
Sensor histidine kinase
no
0.17
13
PP
_2498
conserved protein of unknown function
no
0.17
14
PP
_4657
zinc metalloprotease
no
0.17
15
PP
_2187
Universal stress protein family
no
0.17
16
PP
_4911
conserved protein of unknown function
no
0.17
17
PP
_4837
conserved protein of unknown function
no
0.17
18
PP
_0675
glutamate dehydrogenase, NADP-dependent
no
0.17
19
PP
_4218
Lipase/esterase family protein
no
0.17
20
PP
_1018
mannose/glucose ABC transporter - ATP binding subunit
no
0.16
Or look for
negative cofitness