Top cofit genes for PP_t29 from Pseudomonas putida KT2440

tRNA-Ala

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2458		ribokinase	no	0.28
2	PP_t11		tRNA-Lys	no	0.28
3	PP_4546		ATP-dependent helicase HrpA	no	0.28
4	PP_1527		tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase)	no	0.27
5	PP_5310		junction-specific ATP-dependent DNA helicase	no	0.27
6	PP_2566		conserved protein of unknown function containing Leucine-rich repeat domain	no	0.27
7	PP_5309		oxidative and nitrosative stress transcriptional dual regulator	no	0.26
8	PP_0208		putative Nitrate ABC transporter, permease protein	no	0.26
9	PP_4880		exoribonuclease R	no	0.26
10	PP_0065		NAD-binding component of TrK potassium transporter	no	0.25
11	PP_3770		conserved protein of unknown function	no	0.25
12	PP_4520		conserved protein of unknown function	no	0.25
13	PP_3256		Glycosyl transferase, group 2 family protein	no	0.24
14	PP_5229		conserved protein of unknown function	no	0.24
15	PP_2210		LysR family transcriptional regulator	no	0.24
16	PP_0888		Photosynthetic apparatus regulatory protein RegA	no	0.23
17	PP_4824		Sensor histidine kinase/response regulator	no	0.22
18	PP_1552		putative Phage replication protein	no	0.22
19	PP_4902		Oligoribonuclease	no	0.22
20	PP_5028		proline iminopeptidase	no	0.22

Or look for negative cofitness