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Cofit
Top cofit genes for PP_t10 from
Pseudomonas putida KT2440
tRNA-Pro
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_3429
Response regulator/sensor histidine kinase
no
0.24
2
PP
_1317
Ubiquinol-cytochrome c reductase iron-sulfur subunit
no
0.23
3
PP
_2929
Carboxynorspermidine/carboxyspermidine decarboxylase
no
0.21
4
PP
_4859
Transcriptional regulator, TetR family
no
0.21
5
PP
_1492
Sensor histidine kinase/response regulator
no
0.20
6
PP
_1623
RNA polymerase, sigma S (sigma 38) factor
no
0.20
7
PP
_1319
Ubiquinol--cytochrome c reductase, cytochrome c1
no
0.20
8
PP
_2379
putative cytochrome oxidase biogenesis protein
no
0.20
9
PP
_0395
putative type IV piliation protein
no
0.20
10
PP
_0951
Ribosome hibernation promoting factor
no
0.20
11
PP
_0397
protein kinase
no
0.19
12
PP
_2928
Saccharopine dehydrogenase
no
0.19
13
PP
_1318
Cytochrome b
no
0.19
14
PP
_0396
conserved protein of unknown function
no
0.19
15
PP
_2449
conserved protein of unknown function
no
0.19
16
PP
_2914
osmosensory proline/betaine/H+ permease
no
0.19
17
PP
_1812
conserved protein of unknown function
no
0.19
18
PP
_0504
Outer membrane protein OprG
no
0.18
19
PP
_0279
conserved protein of unknown function
no
0.18
20
PP
_4917
3',5'-cyclic-nucleotide phosphodiesterase
no
0.18
Or look for
negative cofitness