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  • Top cofit genes for PP_5703 from Pseudomonas putida KT2440

    putative type 3 effector HopPmaJ
    SEED: Type III effector HopPmaJ

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5381 hypothetical protein no 0.17
    2 PP_4704 conserved protein of unknown function no 0.16
    3 PP_0227 periplasmic cystine-binding protein no 0.16
    4 PP_4950 conserved protein of unknown function no 0.16
    5 PP_3849 putative calcium-binding protein, hemolysin-type no 0.15
    6 PP_5380 copper resistance protein A 0.25 0.15
    7 PP_4448 conserved protein of unknown function no 0.14
    8 PP_4073 conserved exported protein of unknown function no 0.14
    9 PP_3293 conserved membrane protein of unknown function no 0.14
    10 PP_1411 GGDEF domain protein no 0.14
    11 PP_3938 conserved protein of unknown function no 0.14
    12 PP_4454 putative Opine ABC transporter, permease protein no 0.14
    13 PP_1278 Alginate biosynthesis protein AlgF no 0.13
    14 PP_2485 conserved protein of unknown function 0.44 0.13
    15 PP_3120 methylglyoxal reductase no 0.13
    16 PP_4839 putative iron-regulated membrane protein no 0.13
    17 PP_4147 microcin C transporter - periplasmic binding protein no 0.13
    18 PP_0618 Branched-chain amino acid ABC transporter, permease protein no 0.13
    19 PP_0210 putative Phycobiliprotein no 0.13
    20 PP_0332 putative Acyltransferase 0.30 0.13

    Or look for negative cofitness