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Cofit
Protein
Homologs
Top cofit genes for PP_5693 from
Pseudomonas putida KT2440
conserved protein of unknown function
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4470
putative transcriptional regulator (Arc domain-containing)
no
0.44
2
PP
_0163
putative transcriptional regulator
no
0.29
3
PP
_5283
periplasmic dipeptide transport protein
no
0.25
4
PP
_0805
Outer membrane efflux protein
no
0.24
5
PP
_2376
Esterified fatty acid cis/trans isomerase
no
0.24
6
PP
_3769
conserved exported protein of unknown function
no
0.24
7
PP
_0806
putative Surface adhesion protein
no
0.24
8
PP
_0803
Protein secretion ABC efflux system, membrane fusion protein
no
0.24
9
PP
_0804
Protein secretion ABC efflux system, permease and ATP-binding protein
no
0.24
10
PP
_1641
tRNA 2-thiocytidine biosynthesis protein TtcA
no
0.23
11
PP
_4726
Chaperone protein DnaJ
no
0.23
12
PP
_1623
RNA polymerase, sigma S (sigma 38) factor
no
0.23
13
PP
_2098
D-alanyl-D-alanine carboxypeptidase
no
0.22
14
PP
_1490
Probable biofilm formation methyltransferase WspC
no
0.22
15
PP
_1782
dTDP-4-dehydrorhamnose 3,5-epimerase
no
0.21
16
PP
_0066
Ribosomal RNA small subunit methyltransferase B
no
0.21
17
PP
_2148
transcription-repair coupling factor
no
0.21
18
PP
_0564
conserved protein of unknown function
no
0.21
19
PP
_1494
Response regulator/GGDEF domain protein
no
0.20
20
PP
_1763
putative oxidoreductase
no
0.20
Or look for
negative cofitness