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  • Top cofit genes for PP_5606 from Pseudomonas putida KT2440

    conserved exported protein of unknown function with YVTN beta-propeller repeat
    SEED: Collagen triple helix repeat domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3490 manganese-oxidizing multicopper oxidase no 0.34
    2 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.28
    3 PP_0395 putative type IV piliation protein no 0.28
    4 PP_0396 conserved protein of unknown function no 0.27
    5 PP_0397 protein kinase no 0.26
    6 PP_4338 Chemotaxis histidine kinase CheA no 0.25
    7 PP_1623 RNA polymerase, sigma S (sigma 38) factor no 0.24
    8 PP_2043 conserved exported protein of unknown function no 0.24
    9 PP_0131 putative membrane-anchored phosphodiesterase no 0.22
    10 PP_4902 Oligoribonuclease no 0.22
    11 PP_2033 conserved protein of unknown function no 0.21
    12 PP_5263 GGDEF domain protein no 0.21
    13 PP_4332 Chemotaxis protein CheW no 0.21
    14 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) no 0.21
    15 PP_4340 response regulator for chemotactic signal transduction no 0.21
    16 PP_3349 3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter no 0.21
    17 PP_1898 MotA/TolQ/ExbB proton channel family protein no 0.20
    18 PP_0218 Sensory box protein no 0.20
    19 PP_4392 chemotaxis protein methyltransferase no 0.20
    20 PP_1879 conserved protein of unknown function no 0.20

    Or look for negative cofitness