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Cofit
Protein
Homologs
Top cofit genes for PP_5580 from
Pseudomonas putida KT2440
protein of unknown function
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0137
glutamate/aspartate-proton DAACS transporter
no
0.26
2
PP
_3551
DNA-binding response regulator, LuxR family
no
0.24
3
PP
_1317
Ubiquinol-cytochrome c reductase iron-sulfur subunit
no
0.24
4
PP
_5337
LysR family transcriptional regulator
no
0.24
5
PP
_2979
conserved protein of unknown function
no
0.22
6
PP
_0489
formate dehydrogenase-O major subunit
no
0.21
7
PP
_2362
putative usher protein
no
0.21
8
PP
_0804
Protein secretion ABC efflux system, permease and ATP-binding protein
no
0.21
9
PP
_3907
conserved protein of unknown function
no
0.20
10
PP
_2871
Class II aldolase/adducin domain protein
no
0.20
11
PP
_4904
Flagellar motor rotation protein
no
0.20
12
PP
_2971
transposase
no
0.20
13
PP
_2567
Hydrolase, alpha/beta fold family
no
0.20
14
PP
_2379
putative cytochrome oxidase biogenesis protein
no
0.20
15
PP
_4892
integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex
no
0.20
16
PP
_1319
Ubiquinol--cytochrome c reductase, cytochrome c1
no
0.20
17
PP
_3104
conserved protein of unknown function
no
0.20
18
PP
_4162
conserved membrane protein of unknown function
no
0.20
19
PP
_2716
arsenate reductase
no
0.20
20
PP
_4342
flagellar synthesis regulator, putative ATPase
no
0.19
Or look for
negative cofitness