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  • Top cofit genes for PP_5502 from Pseudomonas putida KT2440

    ribosome modulation factor
    SEED: Ribosome modulation factor
    KEGG: ribosome modulation factor

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0951 Ribosome hibernation promoting factor 0.74 0.83
    2 PP_0396 conserved protein of unknown function 0.58 0.59
    3 PP_0397 protein kinase no 0.59
    4 PP_0395 putative type IV piliation protein 0.59 0.59
    5 PP_4143 conserved protein of unknown function 0.30 0.52
    6 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.67 0.52
    7 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.50
    8 PP_0185 Positive alginate biosynthesis regulatory protein 0.34 0.50
    9 PP_3484 Response regulator receiver protein no 0.50
    10 PP_0995 conserved membrane protein of unknown function no 0.49
    11 PP_1318 Cytochrome b no 0.49
    12 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon no 0.46
    13 PP_4343 Flagellar biosynthesis protein FlhF no 0.46
    14 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.45
    15 PP_4008 ATP-dependent serine protease no 0.45
    16 PP_4342 flagellar synthesis regulator, putative ATPase 0.47 0.45
    17 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein no 0.45
    18 PP_1778 Lipopolysaccharide ABC export system, permease protein no 0.45
    19 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.44
    20 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.31 0.44

    Or look for negative cofitness