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  • Top cofit genes for PP_5441 from Pseudomonas putida KT2440

    protein of unknown function

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0298 AraC-family transcriptional regulator no 0.32
    2 PP_0315 putative glycine-betaine dioxygenase subunit no 0.26
    3 PP_0316 putative glycine-betaine dioxygenase subunit no 0.25
    4 PP_0325 sarcosine oxidase subunit alpha no 0.23
    5 PP_0322 serine hydroxymethyltransferase no 0.23
    6 PP_0309 conserved protein of unknown function no 0.22
    7 PP_0323 sarcosine oxidase subunit beta no 0.21
    8 PP_0304 Carnitine uptake ABC transporter, periplasmic component no 0.20
    9 PP_0302 L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) no 0.20
    10 PP_0324 sarcosine oxidase subunit delta no 0.20
    11 PP_3957 choline/carnitine/betaine transporter BetTC no 0.20
    12 PP_1320 stringent starvation protein A no 0.19
    13 PP_0294 Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) no 0.18
    14 PP_0301 betainyl-CoA thiolase no 0.18
    15 PP_0295 choline / betaine / carnitine ABC transporter - membrane subunit no 0.18
    16 PP_5064 choline dehydrogenase no 0.17
    17 PP_1456 conserved membrane protein of unknown function no 0.16
    18 PP_0947 conserved membrane protein of unknown function no 0.16
    19 PP_3920 putative Phage integrase no 0.16
    20 PP_4978 conserved protein of unknown function no 0.16

    Or look for negative cofitness