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Cofit
Protein
Homologs
Top cofit genes for PP_5441 from
Pseudomonas putida KT2440
protein of unknown function
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0298
AraC-family transcriptional regulator
no
0.32
2
PP
_0315
putative glycine-betaine dioxygenase subunit
no
0.26
3
PP
_0316
putative glycine-betaine dioxygenase subunit
no
0.25
4
PP
_0325
sarcosine oxidase subunit alpha
no
0.23
5
PP
_0322
serine hydroxymethyltransferase
no
0.23
6
PP
_0309
conserved protein of unknown function
no
0.22
7
PP
_0323
sarcosine oxidase subunit beta
no
0.21
8
PP
_0304
Carnitine uptake ABC transporter, periplasmic component
no
0.20
9
PP
_0302
L-carnitine 3-dehydrogenase (EC 1.1.1.108)
(from data)
no
0.20
10
PP
_0324
sarcosine oxidase subunit delta
no
0.20
11
PP
_3957
choline/carnitine/betaine transporter BetTC
no
0.20
12
PP
_1320
stringent starvation protein A
no
0.19
13
PP
_0294
Choline / carnitine / glycine betaine ABC transporter, ATPase component
(from data)
no
0.18
14
PP
_0301
betainyl-CoA thiolase
no
0.18
15
PP
_0295
choline / betaine / carnitine ABC transporter - membrane subunit
no
0.18
16
PP
_5064
choline dehydrogenase
no
0.17
17
PP
_1456
conserved membrane protein of unknown function
no
0.16
18
PP
_0947
conserved membrane protein of unknown function
no
0.16
19
PP
_3920
putative Phage integrase
no
0.16
20
PP
_4978
conserved protein of unknown function
no
0.16
Or look for
negative cofitness