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  • Top cofit genes for PP_5386 from Pseudomonas putida KT2440

    Probable copper RND efflux membrane fusion protein, CzcB family
    SEED: Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
    KEGG: Cu(I)/Ag(I) efflux system membrane protein CusB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5387 probable copper efflux transporter, CzcA family 0.61 0.30
    2 PP_0144 Metalloprotease, insulinase family no 0.23
    3 PP_5405 transposase no 0.23
    4 PP_1654 cysteine synthase B no 0.20
    5 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.20
    6 PP_5361 47 kDa protein no 0.20
    7 PP_3999 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase no 0.20
    8 PP_4461 Major facilitator family transporter no 0.20
    9 PP_3692 conserved protein of unknown function no 0.19
    10 PP_5531 conserved protein of unknown function no 0.19
    11 PP_1656 ATP:GTP 3'-pyrophosphotransferase no 0.19
    12 PP_2371 Sulphite reductase hemoprotein, beta subunit no 0.19
    13 PP_5727 protein of unknown function no 0.19
    14 PP_4467 Transcriptional regulator, LysR family no 0.19
    15 PP_1118 Recombinase-related protein no 0.18
    16 PP_4458 putative Opine ABC transporter, periplasmic binding protein no 0.18
    17 PP_5384 copper sensor protein no 0.18
    18 PP_1229 putrescine permease no 0.17
    19 PP_2370 conserved protein of unknown function no 0.17
    20 PP_5392 conserved hypothetical protein containing WD40/YVTN repeat domain no 0.17

    Or look for negative cofitness