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  • Top cofit genes for PP_5348 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: LysR family transcriptional regulator PA5437

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5347 pyruvate carboxylase subunit A 0.99 0.95
    2 PP_5346 pyruvate carboxylase subunit B 0.99 0.94
    3 PP_0362 Biotin synthase 0.97 0.72
    4 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.96 0.64
    5 PP_0363 8-amino-7-oxononanoate synthase 0.96 0.64
    6 PP_0364 pimeloyl-[acp] methyl ester esterase 0.91 0.63
    7 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.96 0.63
    8 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.93 0.59
    9 PP_3417 D-gluconate transporter 0.97 0.59
    10 PP_0366 dethiobiotin synthetase 0.90 0.58
    11 PP_5098 methionine biosynthesis protein MetW 0.97 0.58
    12 PP_2168 Transaldolase 0.71 0.57
    13 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.97 0.57
    14 PP_5097 homoserine O-acetyltransferase 0.97 0.56
    15 PP_4678 Ketol-acid reductoisomerase 0.97 0.56
    16 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.98 0.56
    17 PP_1988 3-isopropylmalate dehydrogenase 0.98 0.55
    18 PP_0965 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.98 0.55
    19 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase 0.97 0.55
    20 PP_1022 glucose 6-phosphate-1-dehydrogenase 0.96 0.55

    Or look for negative cofitness