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  • Top cofit genes for PP_5342 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: GntR family transcriptional regulator / MocR family aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0043 cation efflux system protein 0.30 0.21
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.20
    3 PP_3662 conserved protein of unknown function no 0.20
    4 PP_5639 conserved exported protein of unknown function no 0.19
    5 PP_3955 permease no 0.18
    6 PP_2021 L-alpha-hydroxyglutaric acid gamma-lactonase 0.31 0.18
    7 PP_0041 cadmium translocating P-type ATPase no 0.17
    8 PP_2032 putative ATPase 0.38 0.17
    9 PP_1791 putative Aldolase/synthase no 0.17
    10 PP_5060 conserved protein of unknown function no 0.17
    11 PP_1303 Sulfate adenylyltransferase subunit 2 0.28 0.17
    12 PP_1888 Fimbrial protein no 0.17
    13 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.22 0.17
    14 PP_0570 lipoprotein of unknown function 0.18 0.17
    15 PP_4515 Transcriptional regulator, MarR family no 0.17
    16 PP_4495 aromatic amino acid transport protein no 0.17
    17 PP_1552 putative Phage replication protein no 0.17
    18 PP_0330 hypothetical protein no 0.16
    19 PP_0089 stress-induced peroxiredoxin, lipoyl-dependent peroxidase 0.33 0.16
    20 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.45 0.16

    Or look for negative cofitness