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  • Top cofit genes for PP_5341 from Pseudomonas putida KT2440

    putrescine-binding periplasmic protein
    SEED: Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)
    KEGG: putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4221 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.17
    2 PP_3547 putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain no 0.16
    3 PP_2363 conserved protein of unknown function 0.34 0.16
    4 PP_2212 Leucine-rich repeat domain protein no 0.16
    5 PP_1797 HlyD family secretion protein no 0.16
    6 PP_3071 acetoacetyl-coenzyme A synthetase no 0.15
    7 PP_5277 Major facilitator family transporter no 0.15
    8 PP_1893 medium-long chain acyl-CoA dehydrogenase 0.31 0.15
    9 PP_0099 conserved protein of unknown function no 0.15
    10 PP_4781 Sensor histidine kinase no 0.15
    11 PP_5305 Epimerase/dehydratase-related protein 0.22 0.14
    12 PP_2008 2,4-dienoyl-CoA reductase no 0.14
    13 PP_1821 Glutathione S-transferase family protein no 0.14
    14 PP_3084 putative Outer membrane ferric siderophore receptor no 0.14
    15 PP_5520 conserved protein of unknown function no 0.14
    16 PP_5276 Phospholipase D family protein no 0.14
    17 PP_3963 conserved protein of unknown function no 0.13
    18 PP_1798 Outer membrane efflux protein no 0.13
    19 PP_2017 aminopeptidase N 0.24 0.13
    20 PP_2394 Leucine-rich repeat domain protein no 0.13

    Or look for negative cofitness