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  • Top cofit genes for PP_5337 from Pseudomonas putida KT2440

    LysR family transcriptional regulator
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5338 aspartate ammonia-lyase 0.98 0.64
    2 PP_0137 glutamate/aspartate-proton DAACS transporter 0.99 0.53
    3 PP_4941 conserved exported protein of unknown function 0.83 0.51
    4 PP_1067 Sensor histidine kinase 0.94 0.48
    5 PP_4944 Carbamoyltransferase 0.88 0.45
    6 PP_0594 Transcriptional regulator, TetR family 0.61 0.44
    7 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.74 0.43
    8 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.46 0.42
    9 PP_0495 type 1 L-asparaginase 0.82 0.41
    10 PP_2379 putative cytochrome oxidase biogenesis protein 0.36 0.39
    11 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.63 0.39
    12 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.62 0.38
    13 PP_4942 conserved protein of unknown function 0.39 0.37
    14 PP_0496 Sodium/alanine symporter 0.82 0.37
    15 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 0.35
    16 PP_1066 C4-dicarboxylate transport transcriptional regulatory protein 0.90 0.35
    17 PP_0397 protein kinase 0.25 0.34
    18 PP_0136 conserved exported protein of unknown function 0.74 0.34
    19 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.65 0.34
    20 PP_0123 DNA polymerase I, 5 0.62 0.33

    Or look for negative cofitness