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  • Top cofit genes for PP_5332 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Aldose 1-epimerase
    KEGG: glucose-6-phosphate 1-epimerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5283 periplasmic dipeptide transport protein 0.63 0.36
    2 PP_0795 fructose PTS permease - IIBC component 0.91 0.33
    3 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.33
    4 PP_5331 Long-chain acyl-CoA thioester hydrolase 0.39 0.33
    5 PP_0794 1-phosphofructokinase monomer 0.26 0.33
    6 PP_0793 Phosphotransferase system, fructose-specific EI/HPr/EIIA components 0.90 0.32
    7 PP_4171 conserved exported protein of unknown function no 0.32
    8 PP_1627 conserved protein of unknown function 0.24 0.32
    9 PP_3769 conserved exported protein of unknown function no 0.31
    10 PP_0540 conserved inner membrane protein 0.24 0.31
    11 PP_1798 Outer membrane efflux protein no 0.30
    12 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.60 0.30
    13 PP_2148 transcription-repair coupling factor 0.36 0.29
    14 PP_1650 Sensor protein GacS 0.60 0.29
    15 PP_3627 conserved protein of unknown function no 0.29
    16 PP_3768 putative shikimate 5-dehydrogenase no 0.28
    17 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.61 0.28
    18 PP_1523 conserved protein of unknown function no 0.28
    19 PP_1663 conserved exported protein of unknown function 0.69 0.27
    20 PP_4173 Sensor histidine kinase/response regulator 0.25 0.26

    Or look for negative cofitness