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Cofit
Protein
Homologs
Top cofit genes for PP_5323 from
Pseudomonas putida KT2440
Peptidase, M23/M37 family
SEED: Peptidase, M23/M37 family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_3246
Beta-carotene hydroxylase
no
0.26
2
PP
_3724
putative Acyl-CoA synthetase
no
0.21
3
PP
_4484
histidine / lysine / arginine / ornithine ABC transporter - permease subunit
no
0.21
4
PP
_3723
putative 2-ketoarginine decarboxylase AruI
no
0.20
5
PP
_4485
histidine / lysine / arginine / ornithine ABC transporter - permease subunit
no
0.20
6
PP
_2398
conserved protein of unknown function, UPF0276 family
no
0.19
7
PP
_3333
conserved protein of unknown function
no
0.19
8
PP
_5091
conserved membrane protein of unknown function
no
0.19
9
PP
_2638
putative Cellulose synthase operon C protein
no
0.19
10
PP
_0024
putative membrane-associated metal-dependent hydrolase
no
0.19
11
PP
_2713
DNA-binding response regulator
0.17
0.18
12
PP
_4486
lysine / arginine / ornithine ABC transporter - periplasmic binding protein
no
0.18
13
PP
_2635
cellulose synthase and translocator subunit
no
0.17
14
PP
_4121
NADH-quinone oxidoreductase subunit C/D
no
0.17
15
PP
_4500
TrpH family protein
no
0.16
16
PP
_4699
3-methyl-2-oxobutanoate hydroxymethyltransferase
no
0.16
17
PP
_5023
Amino acid ABC transporter, permease protein
no
0.16
18
PP
_5598
conserved protein of unknown function
no
0.16
19
PP
_2043
conserved exported protein of unknown function
no
0.16
20
PP
_0217
delta-9 fatty acid desaturase
no
0.16
Or look for
negative cofitness