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  • Top cofit genes for PP_5322 from Pseudomonas putida KT2440

    putative metal ion transporter
    SEED: Phosphate regulon metal ion transporter containing CBS domains

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein 0.95 0.80
    2 PP_3599 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) no 0.43
    3 PP_3244 Magnesium transporter, MgtC family 0.72 0.38
    4 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.64 0.37
    5 PP_0247 Osmolarity sensor protein EnvZ 0.50 0.36
    6 PP_2645 magnesium transporter, ATP-dependent 0.28 0.31
    7 PP_1171 Uronate dehydrogenase (EC 1.1.1.203) (from data) no 0.31
    8 PP_1669 NLP/P60 family protein 0.63 0.31
    9 PP_5055 Sulfurtransferase no 0.31
    10 PP_3601 galactarate dehydratase no 0.31
    11 PP_3245 conserved protein of unknown function no 0.30
    12 PP_3602 2,5-dioxovalerate dehydrogenase 0.33 0.30
    13 PP_2322 Major outer membrane lipoprotein 0.62 0.29
    14 PP_1321 ClpXP protease specificity-enhancing factor 0.31 0.29
    15 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) no 0.28
    16 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) no 0.28
    17 PP_3600 glucarate transporter no 0.28
    18 PP_1170 D-glucaro-1,5-lactonase UxuL (from data) no 0.28
    19 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.68 0.28
    20 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.39 0.27

    Or look for negative cofitness