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  • Top cofit genes for PP_5317 from Pseudomonas putida KT2440

    Probable chorismate pyruvate-lyase
    SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
    KEGG: chorismate--pyruvate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0495 type 1 L-asparaginase 0.44 0.25
    2 PP_4214 pyoverdine biosynthesis related protein no 0.22
    3 PP_4213 putative dipeptidase 0.21 0.22
    4 PP_1367 formyltetrahydrofolate hydrolase 0.28 0.20
    5 PP_2329 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex 0.85 0.20
    6 PP_4245 hydroxyproline acetylase no 0.19
    7 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase no 0.19
    8 PP_4215 pyoverdine biosynthesis related protein 0.69 0.18
    9 PP_5706 Sec translocation complex - SecG subunit no 0.18
    10 PP_5337 LysR family transcriptional regulator 0.46 0.18
    11 PP_0855 conserved protein of unknown function 0.43 0.17
    12 PP_3668 Catalase-peroxidase no 0.17
    13 PP_4393 putative chemotaxis protein no 0.16
    14 PP_1797 HlyD family secretion protein no 0.15
    15 PP_4057 conserved membrane protein of unknown function with autotransporter beta-domain no 0.15
    16 PP_1644 NAD(P)H dehydrogenase (quinone) 0.37 0.15
    17 PP_1389 Oxaloacetate decarboxylase no 0.15
    18 PP_0114 methionine ABC transporter ATP-binding protein no 0.15
    19 PP_1428 Sigma factor AlgU negative regulatory protein no 0.15
    20 PP_3325 putative Outer membrane ferric siderophore receptor 0.51 0.15

    Or look for negative cofitness