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  • Top cofit genes for PP_5310 from Pseudomonas putida KT2440

    junction-specific ATP-dependent DNA helicase
    SEED: ATP-dependent DNA helicase RecG (EC 3.6.1.-)
    KEGG: ATP-dependent DNA helicase RecG

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.99 0.61
    2 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.85 0.59
    3 PP_0123 DNA polymerase I, 5 0.84 0.59
    4 PP_1629 Protein RecA 0.98 0.58
    5 PP_4880 exoribonuclease R 0.87 0.57
    6 PP_1734 Probable septum site-determining protein MinC 0.55 0.57
    7 PP_1783 dTDP-glucose pyrophosphorylase 0.56 0.56
    8 PP_1733 membrane ATPase of the MinC-MinD-MinE system 0.74 0.56
    9 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.93 0.50
    10 PP_4004 DNA translocase FtsK 0.73 0.50
    11 PP_4124 NADH-quinone oxidoreductase subunit G 0.27 0.49
    12 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.70 0.49
    13 PP_4804 RlpA-like lipoprotein 0.62 0.49
    14 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L no 0.48
    15 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.87 0.47
    16 PP_1215 Crossover junction endodeoxyribonuclease RuvC 0.78 0.47
    17 PP_4131 NADH-quinone oxidoreductase subunit N no 0.47
    18 PP_5230 Tyrosine recombinase XerC 0.82 0.46
    19 PP_0393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase no 0.46
    20 PP_1353 conserved membrane protein of unknown function 0.32 0.45

    Or look for negative cofitness