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  • Top cofit genes for PP_5284 from Pseudomonas putida KT2440

    UPF0758 protein PP_5284
    SEED: DNA repair protein RadC
    KEGG: DNA repair protein RadC

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function no 0.72
    2 PP_1798 Outer membrane efflux protein no 0.71
    3 PP_3627 conserved protein of unknown function no 0.69
    4 PP_5283 periplasmic dipeptide transport protein 0.59 0.68
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.58 0.68
    6 PP_0540 conserved inner membrane protein 0.41 0.67
    7 PP_2148 transcription-repair coupling factor 0.57 0.65
    8 PP_1774 conserved exported protein of unknown function no 0.64
    9 PP_1777 phosphomannomutase no 0.64
    10 PP_1803 UDP-sugar epimerase no 0.63
    11 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.48 0.61
    12 PP_1797 HlyD family secretion protein no 0.60
    13 PP_1871 Protease HtpX 0.22 0.60
    14 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.60
    15 PP_5279 conserved protein of unknown function 0.50 0.59
    16 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase 0.16 0.58
    17 PP_1800 Oxidoreductase Rmd no 0.57
    18 PP_1801 Glycosyl transferase WbpY 0.33 0.56
    19 PP_1663 conserved exported protein of unknown function no 0.56
    20 PP_1805 Polysaccharide biosynthesis protein 0.22 0.56

    Or look for negative cofitness