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  • Top cofit genes for PP_5277 from Pseudomonas putida KT2440

    Major facilitator family transporter
    SEED: Major facilitator family transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function 0.64 0.31
    2 PP_1798 Outer membrane efflux protein no 0.30
    3 PP_0405 conserved protein of unknown function 0.38 0.30
    4 PP_3627 conserved protein of unknown function no 0.30
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.52 0.30
    6 PP_0540 conserved inner membrane protein 0.29 0.29
    7 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.29
    8 PP_0434 Anhydro-N-acetylmuramic acid kinase 0.35 0.28
    9 PP_1355 Muropeptide permease AmpG 0.68 0.28
    10 PP_2148 transcription-repair coupling factor no 0.27
    11 PP_1871 Protease HtpX no 0.26
    12 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase no 0.25
    13 PP_1626 DNA mismatch repair protein MutS 0.43 0.25
    14 PP_5113 predicted Zn-dependent peptidases no 0.25
    15 PP_1663 conserved exported protein of unknown function 0.26 0.25
    16 PP_1797 HlyD family secretion protein no 0.25
    17 PP_1790 putative Acylneuraminate cytidylyltransferase no 0.24
    18 PP_2032 putative ATPase 0.52 0.24
    19 PP_1774 conserved exported protein of unknown function no 0.24
    20 PP_0725 conserved hypothetical TPR repeat protein no 0.24

    Or look for negative cofitness