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Cofit
Protein
Homologs
Top cofit genes for PP_5263 from
Pseudomonas putida KT2440
GGDEF domain protein
SEED: GGDEF domain/EAL domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4392
chemotaxis protein methyltransferase
no
0.25
2
PP
_4334
ParA family protein
0.52
0.25
3
PP
_4338
Chemotaxis histidine kinase CheA
0.62
0.24
4
PP
_5028
proline iminopeptidase
no
0.24
5
PP
_4824
Sensor histidine kinase/response regulator
no
0.24
6
PP
_0218
Sensory box protein
0.73
0.23
7
PP
_1733
membrane ATPase of the MinC-MinD-MinE system
0.32
0.23
8
PP
_4340
response regulator for chemotactic signal transduction
no
0.23
9
PP
_4365
Flagellar protein FliJ
0.29
0.23
10
PP
_1734
Probable septum site-determining protein MinC
no
0.23
11
PP
_3834
conserved protein of unknown function
no
0.23
12
PP
_4389
Flagellar basal-body rod modification protein FlgD
no
0.23
13
PP
_1883
protein of unknown function
no
0.22
14
PP
_2690
conserved protein of unknown function
no
0.22
15
PP
_4352
flagellin export apparatus, substrate specificity protein
0.29
0.22
16
PP
_3349
3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter
no
0.22
17
PP
_4354
flagellar export apparatus subunit
0.33
0.22
18
PP
_4361
Flagellar hook-length control protein FliK
0.33
0.22
19
PP
_4902
Oligoribonuclease
no
0.22
20
PP
_4333
CheW domain protein
0.35
0.21
Or look for
negative cofitness