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  • Top cofit genes for PP_5261 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3244 Magnesium transporter, MgtC family no 0.31
    2 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding 0.30 0.28
    3 PP_5262 Probable multidrug resistance protein NorM 0.31 0.27
    4 PP_0506 putative ABC efflux transporter, permease protein 0.31 0.25
    5 PP_1301 quality control serine endoprotease DegS 0.44 0.24
    6 PP_3790 diaminopimelate epimerase no 0.24
    7 PP_4300 putative hydroxypyruvate reductase no 0.24
    8 PP_2892 conserved exported protein of unknown function 0.27 0.22
    9 PP_3376 putative phosphonate dehydrogenase no 0.22
    10 PP_3245 conserved protein of unknown function no 0.22
    11 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.22
    12 PP_2714 Sensor histidine kinase no 0.21
    13 PP_1111 putative Synthetase no 0.21
    14 PP_1501 conserved protein of unknown function 0.45 0.21
    15 PP_3788 putative Non-ribosomal peptide synthetase no 0.21
    16 PP_5135 ABC transporter, periplasmic binding protein no 0.21
    17 PP_1011 glucokinase no 0.21
    18 PP_2129 conserved protein of unknown function 0.24 0.21
    19 PP_1109 Transcriptional regulator, GntR family no 0.21
    20 PP_1110 serine acetyltransferase no 0.20

    Or look for negative cofitness