Top cofit genes for PP_5259 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3957		choline/carnitine/betaine transporter BetTC	no	0.38
2	PP_1786		putative Glycosyl transferase	no	0.29
3	PP_2448		Gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data)	no	0.28
4	PP_5064		choline dehydrogenase	no	0.28
5	PP_4859		Transcriptional regulator, TetR family	no	0.26
6	PP_4978		conserved protein of unknown function	no	0.25
7	PP_0498		conserved protein of unknown function	no	0.25
8	PP_1368		putative membrane protein containing a glycosyltransferase domain	no	0.25
9	PP_1370		Glycosyl transferase, group 1 family protein	no	0.25
10	PP_2379		putative cytochrome oxidase biogenesis protein	no	0.24
11	PP_0439		conserved protein of unknown function	no	0.24
12	PP_1363		conserved protein of unknown function	no	0.23
13	PP_1795		conserved protein of unknown function	no	0.23
14	PP_1126		putative Hydrolase	no	0.23
15	PP_3939		porin-like protein	no	0.23
16	PP_0496		Sodium/alanine symporter	no	0.23
17	PP_4475		succinylglutamate desuccinylase	no	0.22
18	PP_2315		Transcription elongation factor GreB	no	0.22
19	PP_4722		Transcription elongation factor GreA	0.30	0.22
20	PP_1369		conserved protein of unknown function	0.33	0.22

Or look for negative cofitness