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  • Top cofit genes for PP_5250 from Pseudomonas putida KT2440

    proline-specific outer membrane porin D
    SEED: Outer membrane porin, OprD family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2638 putative Cellulose synthase operon C protein no 0.23
    2 PP_1821 Glutathione S-transferase family protein no 0.23
    3 PP_2210 LysR family transcriptional regulator no 0.23
    4 PP_3744 transcriptional dual regulator GlcC-Glycolate no 0.22
    5 PP_0369 putative diguanylate cyclase no 0.22
    6 PP_2025 Exonuclease SbcD no 0.20
    7 PP_4544 conserved exported protein of unknown function no 0.20
    8 PP_1555 putative Phage integrase no 0.20
    9 PP_2934 conserved exported protein of unknown function no 0.20
    10 PP_4542 putative ABC transporter, ATP-binding protein/permease protein 0.18 0.19
    11 PP_1755 fumarate hydratase (class 2) no 0.19
    12 PP_1903 putative phosphotyrosine-protein phosphatase no 0.19
    13 PP_0632 leader peptidase/N-methyltransferase no 0.18
    14 PP_4839 putative iron-regulated membrane protein no 0.18
    15 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase no 0.18
    16 PP_4999 dihydroorotase-like protein 0.29 0.18
    17 PP_3399 minor curlin subunit CsgB, nucleation component of curlin monomers no 0.18
    18 PP_0355 Response regulator no 0.18
    19 PP_2694 Aldehyde dehydrogenase family protein no 0.18
    20 PP_t11 tRNA-Lys no 0.18

    Or look for negative cofitness