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  • Top cofit genes for PP_5221 from Pseudomonas putida KT2440

    conserved protein of unknown function, UPF0178 family
    SEED: probable P23 protein
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4005 Leucyl/phenylalanyl-tRNA--protein transferase 0.41 0.18
    2 PP_4930 putative small multidrug resistance protein no 0.17
    3 PP_1883 protein of unknown function no 0.16
    4 PP_5500 protein of unknown function no 0.16
    5 PP_0799 histidine-specific outer membrane porin D no 0.15
    6 PP_1814 conserved protein of unknown function no 0.15
    7 PP_0926 putative Membrane protein 0.24 0.15
    8 PP_1571 conserved protein of unknown function no 0.15
    9 PP_1881 conserved protein of unknown function no 0.14
    10 PP_2021 L-alpha-hydroxyglutaric acid gamma-lactonase no 0.14
    11 PP_2007 P-47-related protein no 0.14
    12 PP_2004 Transcriptional regulator, AraC family no 0.14
    13 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites 0.27 0.14
    14 PP_3563 conserved exported protein of unknown function no 0.14
    15 PP_2900 conserved protein of unknown function no 0.14
    16 PP_1208 conserved protein of unknown function, SlyX family no 0.14
    17 PP_3946 HTH-type transcriptional repressor NicR no 0.14
    18 PP_2800 putative Diaminobutyrate-2-oxoglutarate transaminase no 0.14
    19 PP_4768 Exonuclease no 0.13
    20 PP_4138 Chromate reductase 0.24 0.13

    Or look for negative cofitness