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  • Top cofit genes for PP_5190 from Pseudomonas putida KT2440

    Type II secretion system protein
    SEED: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
    KEGG: general secretion pathway protein E

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1714 FKBP-type peptidyl-prolyl cis-trans isomerase 0.75 0.17
    2 PP_4859 Transcriptional regulator, TetR family 0.23 0.17
    3 PP_5348 Transcriptional regulator, LysR family no 0.16
    4 PP_1374 conserved protein of unknown function 0.32 0.16
    5 PP_1191 S4 domain protein no 0.16
    6 PP_1352 UPF0234 protein PP_1352 0.63 0.16
    7 PP_0624 Uncharacterized protein YfiH no 0.15
    8 PP_3664 CDP-diacylglycerol--serine O-phosphatidyltransferase 0.45 0.15
    9 PP_0570 lipoprotein of unknown function 0.31 0.15
    10 PP_1757 DNA-binding transcriptional dual regulator 0.40 0.15
    11 PP_4776 AsnC family transcriptional regulator 0.47 0.15
    12 PP_4507 potassium transporter 0.71 0.15
    13 PP_4977 5,10-methylenetetrahydrofolate reductase 0.41 0.15
    14 PP_5603 putative FAD dependent oxidoreductase no 0.14
    15 PP_5347 pyruvate carboxylase subunit A no 0.14
    16 PP_4978 conserved protein of unknown function no 0.14
    17 PP_5025 Glucans biosynthesis glucosyltransferase H no 0.14
    18 PP_1320 stringent starvation protein A 0.84 0.14
    19 PP_4514 putative esterase of the alpha-beta hydrolase superfamily 0.46 0.14
    20 PP_3059 putative tail sheath protein no 0.14

    Or look for negative cofitness