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  • Top cofit genes for PP_5186 from Pseudomonas putida KT2440

    acetylornithine deacetylase
    SEED: Acetylornithine deacetylase (EC 3.5.1.16)
    KEGG: acetylornithine deacetylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1821 Glutathione S-transferase family protein no 0.22
    2 PP_3719 Putrescine-binding periplasmic protein no 0.20
    3 PP_2638 putative Cellulose synthase operon C protein no 0.19
    4 PP_5471 putative response regulator receiver protein no 0.18
    5 PP_4521 putative aerotaxis receptor no 0.18
    6 PP_2025 Exonuclease SbcD no 0.17
    7 PP_4223 diaminobutyrate-2-oxoglutarate transaminase no 0.17
    8 PP_1875 Sensor histidine kinase/response regulator 0.15 0.17
    9 PP_3727 Amino-acid permease RocE no 0.17
    10 PP_2549 conserved protein of unknown function no 0.16
    11 PP_0208 putative Nitrate ABC transporter, permease protein no 0.16
    12 PP_1504 conserved protein of unknown function no 0.16
    13 PP_2177 putative transcriptional regulator no 0.16
    14 PP_3399 minor curlin subunit CsgB, nucleation component of curlin monomers no 0.16
    15 PP_0355 Response regulator no 0.16
    16 PP_0090 conserved exported protein of unknown function no 0.16
    17 PP_0072 quinone oxidoreductase no 0.15
    18 PP_2857 conserved exported protein of unknown function no 0.15
    19 PP_2678 putative Hydrolase no 0.15
    20 PP_1894 glutathione S-transferase reducing arsenate to arsenite 0.22 0.15

    Or look for negative cofitness