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Cofit
Protein
Homologs
Top cofit genes for PP_5173 from
Pseudomonas putida KT2440
RND efflux transporter
SEED: RND efflux transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_5175
HlyD family secretion protein
0.94
0.20
2
PP
_5380
copper resistance protein A
no
0.20
3
PP
_0333
conserved exported protein of unknown function
no
0.16
4
PP
_0030
metal-sensor histidine kinase
no
0.16
5
PP
_5651
conserved protein of unknown function
no
0.16
6
PP
_3383
gluconate 2-dehydrogenase flavoprotein subunit
0.34
0.16
7
PP
_3849
putative calcium-binding protein, hemolysin-type
no
0.15
8
PP
_5447
conserved membrane protein of unknown function
no
0.15
9
PP
_5404
Transposition protein, TnsC-related protein
no
0.15
10
PP
_0375
Prolyl oligopeptidase family protein
no
0.14
11
PP
_1781
putative O-acyltransferase
no
0.14
12
PP
_5220
putative hydrolase
no
0.14
13
PP
_2454
ribose ABC transporter, periplasmic ribose-binding subunit
no
0.14
14
PP
_5509
conserved exported protein of unknown function
no
0.14
15
PP
_1238
putative Lipoprotein
no
0.13
16
PP
_5367
Transketolase domain protein
no
0.13
17
PP
_1192
Acetyltransferase, GNAT family
no
0.13
18
PP
_2457
DNA-binding transcriptional repressor
no
0.13
19
PP
_4031
Na(+)/H(+) antiporter NhaB
no
0.13
20
PP
_0216
putative sensory box/GGDEF family protein
0.17
0.13
Or look for
negative cofitness