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  • Top cofit genes for PP_5146 from Pseudomonas putida KT2440

    RNA pyrophosphohydrolase
    SEED: Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)
    KEGG: putative (di)nucleoside polyphosphate hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) 0.81 0.66
    2 PP_0948 Phosphocarrier protein HPr 0.60 0.55
    3 PP_2148 transcription-repair coupling factor 0.88 0.53
    4 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.83 0.45
    5 PP_1702 Recombination-associated protein RdgC no 0.45
    6 PP_1871 Protease HtpX 0.69 0.44
    7 PP_1036 membrane-bound lytic murein transglycosylase F no 0.43
    8 PP_0540 conserved inner membrane protein 0.91 0.43
    9 PP_0937 endoribonuclease G (RNAse G) 0.82 0.43
    10 PP_4726 Chaperone protein DnaJ 0.36 0.42
    11 PP_4936 O-antigen polymerase 0.26 0.42
    12 PP_1777 phosphomannomutase no 0.42
    13 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.44 0.42
    14 PP_1627 conserved protein of unknown function 0.64 0.42
    15 PP_1803 UDP-sugar epimerase 0.39 0.41
    16 PP_4938 putative Glycosyl transferase no 0.41
    17 PP_0949 putative ATP-binding protein UPF0042 0.72 0.41
    18 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.68 0.41
    19 PP_3627 conserved protein of unknown function no 0.41
    20 PP_1805 Polysaccharide biosynthesis protein 0.85 0.40

    Or look for negative cofitness