Top cofit genes for PP_5145 from Pseudomonas putida KT2440

phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins)
KEGG: phosphotransferase system, enzyme I, PtsP

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0948		Phosphocarrier protein HPr	0.99	0.82
2	PP_5146		RNA pyrophosphohydrolase	0.81	0.66
3	PP_1623		RNA polymerase, sigma S (sigma 38) factor	0.84	0.46
4	PP_0949		putative ATP-binding protein UPF0042	0.92	0.45
5	PP_0397		protein kinase	0.67	0.44
6	PP_0395		putative type IV piliation protein	0.68	0.44
7	PP_4726		Chaperone protein DnaJ	0.43	0.43
8	PP_1036		membrane-bound lytic murein transglycosylase F	0.79	0.43
9	PP_2148		transcription-repair coupling factor	0.95	0.43
10	PP_0396		conserved protein of unknown function	0.56	0.43
11	PP_1778		Lipopolysaccharide ABC export system, permease protein	0.37	0.41
12	PP_1779		Lipopolysaccharide ABC export system, ATP-binding protein	0.32	0.41
13	PP_2027		conserved exported protein of unknown function	0.38	0.40
14	PP_0789		N-acetyl-anhydromuramyl-L-alanine-amidase	0.84	0.39
15	PP_1777		phosphomannomutase	no	0.38
16	PP_4936		O-antigen polymerase	0.37	0.38
17	PP_1702		Recombination-associated protein RdgC	no	0.38
18	PP_2028		conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat	no	0.38
19	PP_1871		Protease HtpX	0.73	0.37
20	PP_4172		conserved exported protein of unknown function	no	0.37

Or look for negative cofitness