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  • Top cofit genes for PP_5136 from Pseudomonas putida KT2440

    ABC transporter, permease protein
    SEED: Ferric iron ABC transporter, permease protein
    KEGG: iron(III) transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1072 Leucine-rich repeat domain protein no 0.29
    2 PP_5242 Sensor histidine kinase/GAF domain protein no 0.26
    3 PP_4246 Periplasmic binding protein no 0.25
    4 PP_1229 putrescine permease no 0.25
    5 PP_4841 putative Urea ABC transporter, periplasmic protein no 0.24
    6 PP_4405 Sensory box protein no 0.22
    7 PP_2072 Transcriptional regulator, AraC family no 0.22
    8 PP_0210 putative Phycobiliprotein no 0.22
    9 PP_5424 conserved protein of unknown function no 0.21
    10 PP_4535 conserved protein of unknown function no 0.20
    11 PP_4585 RNA methyltransferase, TrmH family no 0.20
    12 PP_2209 2-aminoethylphosphonate--pyruvate transaminase 0.24 0.19
    13 PP_4986 Channel protein, hemolysin III family no 0.19
    14 PP_4924 Serine protease, subtilase family no 0.19
    15 PP_0090 conserved exported protein of unknown function no 0.19
    16 PP_2248 putative transporter no 0.19
    17 PP_4272 conserved membrane protein of unknown function no 0.19
    18 PP_2042 conserved exported protein of unknown function no 0.18
    19 PP_0611 Type IV pili biogenesis protein PilE no 0.18
    20 PP_5605 conserved exported protein of unknown function no 0.18

    Or look for negative cofitness